Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934800.1_cds_XP_016480808.1_72209
CDS Infomation

[gene=LOC107801908] [db_xref=GeneID:107801908] [protein=two-component response regulator-like APRR9 isoform X2] [protein_id=XP_016480808.1] [location=join(22261..22285,22378..22508,22613..22753,23124..23235,23320..23689,23911..24562,24994..25086)] [gbkey=CDS]
Sequence

ATGTGCAAAAACATACCTGTTATAATGATGTCGTCCAAGGATTCCATTGGCACGGTCTTG
AAATGTATGGTTAAAGGAGCTTCCGACTTTCTTATGAAGCCTGTTAGGAAAAATGAGCTG
AGGAACCTGTGGCAGCATGTTTGGAGAAGAAAAACCCAAAGTGCTGGAAGCCGTCCTCAA
AATAAAGCTGTTGAAAACCAGAAAGTAGCTGTGTCTGAGAACGAAGCAGCAAGTAATTAT
TCTAGCGACAATCTGGCTTCTATTCAAAGAGGAAATGACAAATCTAGTGATGCACAAGGC
ATTACAGATATAAGATGTATAGATGCTTCAAATATGCGCGATGATAAATGGCATGAAGAA
TGTGTTGAAATGGTCGAAAGATCATTTGTGCCAAAAAGTAAATTACTAGCAAACATGACT
AGCTCGGGAATAGGAACTTCTTCTTGCACTGGACCTTACAGCTCAGTTGCTATTAGTTCA
GAGGAAGGCTCTCTTTGTGCTGAACCAAGGAGTCATAGTGAAAATACTTGTACTGTTGAT
GAAGTTGATTGCCAGTTGAATGAACTCTATTCTGCACCTTGTACTGAAGCCGTTGACTTG
ATTGGGAAATTTGAAAATTGCTTGGCTGATAACGGCCATTCTGATGAAAGAAAAGAGAAA
TCAAATGTTGCTTCCCGGTTGGGACTTTCTTTGAGAACATTTAATCCCAGTTTCTCAAAC
GATGACCGGTCCAGAGAGCAGAACATGATAAGTCATTCAAAAGTATCTGCCTTTGCTAAA
TATGAAAATAAGAAGACAATACAATATCTTTTCTCTGGATTGACTAGCAATTCTGGTCCA
TTCAAGGAAGGCTCTAGTGCGTCTACTTTGGAGCATGACGCTTCATTGACTGAGAGTGAG
CAAAACGCAACAGCTCTGGTTATGCGCCAACCAGGAAATTGTAAAGCTGCAATATCGGAC
AACCAACTAGAATCAGGTTATCAACAATTACAGAGTCCTAAATCACAATCTCCACTTCCA
ACAAGTTCTTTGACTTATTCAACTTCCGAAGTACAAAATCTTGAGCACAGCAAGCAGCCA
TTTGATGATACTACAGTTCACTCTGAGGACAATGCGGAAGAAGCAGATAATGGAAAGTTA
GTAACAGTTGAAAAGGCAAAATGTGATTCTGCAACTTGTGGATCTAATGATTTGGGAAGT
GGCGTGACAAATAAGCTCAGTAGCCCTCGTTGCGGAAGTACTTCCAATGAAGCTATAGAA
AGTTCCTCTGCAGTTGCAAGTCCGGGGAGAGATCCTGTTTCTGAAAGTGTGAACTACAAC
GGCATCCTTCAACTTGATAGGACGAGAGGGGAGAGTCATAGTACCAGTCAAAGGGAAGCG
GCACTCGTGAAGTTTCGGTTAAAACGGAAAGATAGATGCTTTGAGAAAAAGGTTCGGTAT
CAAAGCAGGAAAAGACTTGCAGAGCAGCGACCTCGAGTGAAAGGACAGTTTGTTCGTCAG
CTGCAAAACGAAGCTCAGCCTTGA

Peptide Sequence

PEP ID

XP_016480808.1
PEP Infomation

PREDICTED: two-component response regulator-like APRR9 isoform X2 [Nicotiana tabacum]
Sequence

MCKNIPVIMMSSKDSIGTVLKCMVKGASDFLMKPVRKNELRNLWQHVWRRKTQSAGSRPQ
NKAVENQKVAVSENEAASNYSSDNLASIQRGNDKSSDAQGITDIRCIDASNMRDDKWHEE
CVEMVERSFVPKSKLLANMTSSGIGTSSCTGPYSSVAISSEEGSLCAEPRSHSENTCTVD
EVDCQLNELYSAPCTEAVDLIGKFENCLADNGHSDERKEKSNVASRLGLSLRTFNPSFSN
DDRSREQNMISHSKVSAFAKYENKKTIQYLFSGLTSNSGPFKEGSSASTLEHDASLTESE
QNATALVMRQPGNCKAAISDNQLESGYQQLQSPKSQSPLPTSSLTYSTSEVQNLEHSKQP
FDDTTVHSEDNAEEADNGKLVTVEKAKCDSATCGSNDLGSGVTNKLSSPRCGSTSNEAIE
SSSAVASPGRDPVSESVNYNGILQLDRTRGESHSTSQREAALVKFRLKRKDRCFEKKVRY
QSRKRLAEQRPRVKGQFVRQLQNEAQP

Transcript Sequence

Gene sequence data has not been registered.